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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6921205_6922004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6921205 - 6922004

Intron Length:

800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTCTAATATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TACTTTCTAATA

Flanking Amino Acid:

PLMMLNAFETLAQEWVENHK

Intron Amino Acid Position:

1879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.9

39.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.58

70.4

Minor 5ss

39.6

-1.2

2.9

57.1

41.1

Minor BPS

54.7

0.14

1.6

64.22

36.6

Associated Gene:

Gene:

SETX

Ensembl Gene ID:

ENSAPLG00000016276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016993

6887886 - 6935713

47828