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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6922105_6922741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6922105 - 6922741

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTTGGGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAACTTTTAAAT

Flanking Amino Acid:

SADMNTADFIAHFRESDLAK

Intron Amino Acid Position:

1912

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

63.4

0.3

1.1

61.8

44.4

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

61.1

0.43

1.3

72.66

37.6

Associated Gene:

Gene:

SETX

Ensembl Gene ID:

ENSAPLG00000016276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016993

6887886 - 6935713

47828