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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6925208_6926041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6925208 - 6926041

Intron Length:

834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGGTTC

5'SS Class:

major

3'SS Sequence:

ATTTTGTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ATTTTGTAAACA

Flanking Amino Acid:

EKCQNRQEPLGNCGDIKLVR

Intron Amino Acid Position:

2156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

66.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

71.1

0.48

1.1

66.9

42.6

Minor 5ss

46.9

-0.3

3.1

58.6

46.3

Minor BPS

52.6

0.08

2.3

72.86

39.5

Associated Gene:

Gene:

SETX

Ensembl Gene ID:

ENSAPLG00000016276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016993

6887886 - 6935713

47828