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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6926144_6926618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6926144 - 6926618

Intron Length:

475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TCATCTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTTTCCTTCATC

Flanking Amino Acid:

SLDKQVEHRMKRKPGDRDQD

Intron Amino Acid Position:

2190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

75.1

35.1

Major BPS

0.62

1.1

77.2

Major PPT

80.8

0.69

0.8

76.2

32.2

Minor 5ss

37.3

-1.4

2.7

42.3

38.4

Minor BPS

76.7

0.82

1.6

86.11

32.2

Associated Gene:

Gene:

SETX

Ensembl Gene ID:

ENSAPLG00000016276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016993

6887886 - 6935713

47828