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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6930237_6930862_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6930237 - 6930862

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

CTCTCTTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AATTCTTTAATG

Flanking Amino Acid:

VGDGREERDNESFSNPQEVK

Intron Amino Acid Position:

2431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.5

40.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

74.9

0.56

0.9

68.7

37.2

Minor 5ss

41.4

-1

3.1

55.9

42.3

Minor BPS

74.2

0.62

1.2

70.85

36.4

Associated Gene:

Gene:

SETX

Ensembl Gene ID:

ENSAPLG00000016276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016993

6887886 - 6935713

47828