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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6931028_6931526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6931028 - 6931526

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAAGAAA

5'SS Class:

major

3'SS Sequence:

TTTTCTTCAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTTTCTTCAACA

Flanking Amino Acid:

EELDRVFKNNGPGEVDTVDA

Intron Amino Acid Position:

2486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

68.2

38.4

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

84.5

0.78

0.8

81.6

28.9

Minor 5ss

30.5

-2.2

3.1

30.6

43.1

Minor BPS

78.6

0.89

1.4

87.68

29.9

Associated Gene:

Gene:

SETX

Ensembl Gene ID:

ENSAPLG00000016276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016993

6887886 - 6935713

47828