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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6931626_6933994_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6931626 - 6933994

Intron Length:

2369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTCTG

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAG

U12 Branch Point Sequence:

ATTATTTTAGGA

Flanking Amino Acid:

VRANSTRGSIGFLASLQRLN

Intron Amino Acid Position:

2519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

65.3

Major BPS

63.7

0.34

1.5

63.4

Major PPT

86.8

0.83

0.7

85.5

29.2

Minor 5ss

43.5

-0.7

2.8

50.1

46.1

Minor BPS

48.2

-0.1

1.8

61.65

38.9

Associated Gene:

Gene:

SETX

Ensembl Gene ID:

ENSAPLG00000016276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016993

6887886 - 6935713

47828