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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6934083_6934646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6934083 - 6934646

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCACA

5'SS Class:

major

3'SS Sequence:

CTTTATTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTTATTTTAAAG

Flanking Amino Acid:

FILGRLKTLMENKDWNELIQ

Intron Amino Acid Position:

2549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

64.3

41.7

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

77.5

0.62

78.2

33.8

Minor 5ss

38.4

-1.3

3.1

46.1

44.2

Minor BPS

63.9

0.3

1.5

68.85

38.6

Associated Gene:

Gene:

SETX

Ensembl Gene ID:

ENSAPLG00000016276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016993

6887886 - 6935713

47828