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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7020522_7051700_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7020522 - 7051700

Intron Length:

31179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGAA

5'SS Class:

major

3'SS Sequence:

TATTATTATCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

LLQAYKWSNKLQYHAGLASG

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.3

34.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.5

0.64

70.5

44.2

Minor 5ss

35.3

-1.7

3.4

46.9

48.4

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

MED27

Ensembl Gene ID:

ENSAPLG00000016059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016762

7017587 - 7110035

92449