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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7081384_7091568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7081384 - 7091568

Intron Length:

10185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAG

U12 Branch Point Sequence:

TTGTTCTTGACA

Flanking Amino Acid:

RPNGASAMLLVTLGKVLKVI

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

51.1

0.03

1.6

43.2

Major PPT

79.2

0.66

76.3

37.8

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

78.2

0.88

1.1

81.71

33.5

Associated Gene:

Gene:

MED27

Ensembl Gene ID:

ENSAPLG00000016059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016762

7017587 - 7110035

92449