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Intron Name: Anas_platyrhynchos_platyrhynchos_18_708560_709904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

708560 - 709904

Intron Length:

1345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGGGA

5'SS Class:

major

3'SS Sequence:

TTTTTCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

CCTAACTGATCA

Flanking Amino Acid:

RAGRLEEALRAFSKTVTKDN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

60.1

40.8

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

0.9

0.6

89.8

18.6

Minor 5ss

22.7

-3.1

3.2

19.9

37.9

Minor BPS

44.7

-0.4

1.9

53.93

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015330

707942 - 721088

13147

ENSAPLT00000018996

707942 - 720878

12937