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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7098689_7107257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7098689 - 7107257

Intron Length:

8569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTGGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATGAAT

U12 Branch Point Sequence:

TTGTCTGGTACA

Flanking Amino Acid:

SKSNYQVFQKVTDHATTALL

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.8

78.8

35.5

Major BPS

0.2

1.3

67.7

36.5

Major PPT

73.7

0.53

68.3

42.2

Minor 5ss

35.5

-1.6

2.8

45.4

42.6

Minor BPS

-0.4

2.4

63.43

Associated Gene:

Gene:

MED27

Ensembl Gene ID:

ENSAPLG00000016059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016762

7017587 - 7110035

92449