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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7107336_7109900_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7107336 - 7109900

Intron Length:

2565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTTTTCTTAATT

Flanking Amino Acid:

MPDVVVRSFMTWLRSYIKLF

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

90.4

0.91

0.6

89.7

18.7

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

84.3

1.15

0.9

92.31

29.9

Associated Gene:

Gene:

MED27

Ensembl Gene ID:

ENSAPLG00000016059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016762

7017587 - 7110035

92449