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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7175995_7180505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7175995 - 7180505

Intron Length:

4511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCAGA

5'SS Class:

major

3'SS Sequence:

CTTTCTTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GAGGTTTTAATA

Flanking Amino Acid:

VKTPEKSANKNVSWLEEKEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

71.7

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.1

0.77

0.7

77.5

31.3

Minor 5ss

40.5

-1.1

2.9

41.4

Minor BPS

0.12

1.4

56.05

37.8

Associated Gene:

Gene:

RAPGEF1

Ensembl Gene ID:

ENSAPLG00000015465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016200

7174849 - 7212735

37887