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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7184010_7188817_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7184010 - 7188817

Intron Length:

4808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCACCCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

CTCCCCTCCACC

Flanking Amino Acid:

VIKAVLDGVKELVRLTIEKQ

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.5

39.1

Major BPS

0.75

78.6

Major PPT

65.9

0.36

0.9

63.1

32.6

Minor 5ss

-2.2

3.3

39.7

46.3

Minor BPS

48.3

-0.1

59.94

45.2

Associated Gene:

Gene:

RAPGEF1

Ensembl Gene ID:

ENSAPLG00000015465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016200

7174849 - 7212735

37887