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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7191070_7192398_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7191070 - 7192398

Intron Length:

1329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGCA

5'SS Class:

major

3'SS Sequence:

TGCTCTGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TTGTTTTTTGCT

Flanking Amino Acid:

SSLPVGINRQDFDVDCYAQR

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

68.6

36.2

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

71.8

0.49

0.9

37.1

Minor 5ss

29.6

-2.3

3.4

39.3

Minor BPS

42.9

-0.4

3.5

74.67

42.9

Associated Gene:

Gene:

RAPGEF1

Ensembl Gene ID:

ENSAPLG00000015465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016200

7174849 - 7212735

37887