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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7203149_7212390_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7203149 - 7212390

Intron Length:

9242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CCGCGTCCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTCCAT

U12 Branch Point Sequence:

GTGTCGTCCATC

Flanking Amino Acid:

NRHSSFPVHSYKSVFRSYSQ

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.6

37.9

Major BPS

49.9

-0

1.4

61.8

44.5

Major PPT

64.7

0.33

0.9

57.9

33.2

Minor 5ss

35.6

-1.6

2.9

44.4

43.5

Minor BPS

41.9

-0.6

2.5

54.87

43.7

Associated Gene:

Gene:

RAPGEF1

Ensembl Gene ID:

ENSAPLG00000015465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016200

7174849 - 7212735

37887