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Intron Name: Anas_platyrhynchos_platyrhynchos_18_720542_720623_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

720542 - 720623

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

CCATTCTGACTT

Flanking Amino Acid:

TDGRLTLCCQDSDSHSGRPI

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

68.8

42.3

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

77.3

0.61

0.8

69.8

36.7

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

47.7

-0

1.7

60.49

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015330

707942 - 721088

13147

ENSAPLT00000018996

707942 - 720878

12937