Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_720748_720990_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

720748 - 720990

Intron Length:

243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTCTC

5'SS Class:

major

3'SS Sequence:

TATGTTTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

GCTTCTTTATGT

Flanking Amino Acid:

KGDMLDILSEVNEEWLEGHC

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.2

67.1

44.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

77.8

0.63

0.9

69.8

41.2

Minor 5ss

42.9

-0.8

3.2

61.5

43.4

Minor BPS

54.8

0.23

1.9

71.96

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014697

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015330

707942 - 721088

13147