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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_722929_723560_R

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
722929 - 723560
Intron Length:
632

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAAAGCC
5'SS Class:
strong_major
3'SS Sequence:
TCTGTCTCCTCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTGAT
U12 Branch Point Sequence:
TTTTGATGATGT
Flanking Amino Acid:
TWSSIHFTQKAGNADIGWTL
Intron Amino Acid Position:
430

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
80.7
0.72
1
69.3
33.7
Major BPS
96.4
1.15
0.6
85.7
34.9
Major PPT
79.3
0.66
0.8
77
31.7
Minor 5ss
31
-2.2
3.4
42.5
44.5
Minor BPS
42.3
-0.5
2.4
69.9
46.5

Associated Gene:

Gene:
ENTPD8
Ensembl Gene ID:
ENSAPLG00000014454
Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015092
722737 - 729339
6603