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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7232960_7233052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7232960 - 7233052

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTGTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CTCCGCTGACCT

Flanking Amino Acid:

GVVALVYSHETRAALSRGDL

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

63.2

0.3

38.8

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

44.3

-0.3

2.1

61.75

47.8

Associated Gene:

Gene:

PRRT1B

Ensembl Gene ID:

ENSAPLG00000029937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040065

7232126 - 7233727

1602

ENSAPLT00000032315

7232126 - 7233536

1411