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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7233188_7233289_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7233188 - 7233289

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTACGTGGC

5'SS Class:

weak_major

3'SS Sequence:

TTTTGCCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

CCTCCCTTGACG

Flanking Amino Acid:

QPGAPPPFSPFELRPGPVPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.4

53.3

45.2

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

86.4

0.82

0.8

77.7

36.7

Minor 5ss

33.8

-1.8

3.4

47.3

42.1

Minor BPS

66.5

0.37

1.4

64.05

Associated Gene:

Gene:

PRRT1B

Ensembl Gene ID:

ENSAPLG00000029937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032315

7232126 - 7233536

1411