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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7233865_7233941_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7233865 - 7233941

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CCGCCCGTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAA

U12 Branch Point Sequence:

CTCCCCTCAGCC

Flanking Amino Acid:

GVSGGTASGKSTVCEKIMEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

55.4

0.13

1.2

59.5

Major PPT

64.6

0.33

0.9

60.4

35.2

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

49.2

-0

1.9

60.11

44.8

Associated Gene:

Gene:

UCK1

Ensembl Gene ID:

ENSAPLG00000027008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039810

7233557 - 7238527

4971