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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7235080_7235200_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7235080 - 7235200

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCACGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

ATTTCTTTCACG

Flanking Amino Acid:

VPTYDFVTHSRLAETTVVYP

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

77.7

0.69

30.2

Major PPT

73.9

0.54

70.6

34.8

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

66.8

0.38

1.8

73.4

39.4

Associated Gene:

Gene:

UCK1

Ensembl Gene ID:

ENSAPLG00000027008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039810

7233557 - 7238527

4971