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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7236581_7236991_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7236581 - 7236991

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

CTGTCCTGTATT

Flanking Amino Acid:

VIIPRGVDNMVAINLIVQHI

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.4

45.1

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

85.6

0.8

0.7

80.7

24.5

Minor 5ss

32.4

-2

2.9

32.4

41.9

Minor BPS

54.8

0.23

1.9

72.35

44.7

Associated Gene:

Gene:

UCK1

Ensembl Gene ID:

ENSAPLG00000027008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039810

7233557 - 7238527

4971