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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_723693_723844_R

Intron Information:

Intron Rank:
7
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
723693 - 723844
Intron Length:
152

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTGAGAGCC
5'SS Class:
strong_major
3'SS Sequence:
GATGACCCCGCAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCCTCAT
U12 Branch Point Sequence:
TGTCCCCTGATG
Flanking Amino Acid:
QAFCNKTWKELEKTFPQDEY
Intron Amino Acid Position:
386

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.8
0.84
0.8
72.1
31.2
Major BPS
82.3
0.8
0.9
81.8
30.8
Major PPT
60.6
0.24
1
51.5
38.6
Minor 5ss
26.3
-2.7
3.1
33.4
42
Minor BPS
53.1
-0
1.8
61.99
39.8

Associated Gene:

Gene:
ENTPD8
Ensembl Gene ID:
ENSAPLG00000014454
Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015092
722737 - 729339
6603