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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7242840_7243210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7242840 - 7243210

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTACGTCTC

5'SS Class:

major

3'SS Sequence:

TGTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

ATTTCTGAGACA

Flanking Amino Acid:

WNVEEHRYGKSQEQKEREVE

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

70.1

40.8

Major BPS

72.5

0.56

1.2

63.4

Major PPT

88.9

0.88

0.7

81.2

36.5

Minor 5ss

39.4

-1.2

3.2

53.2

Minor BPS

47.9

-0.1

2.3

67.9

Associated Gene:

Gene:

POMT1

Ensembl Gene ID:

ENSAPLG00000014827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015508

7240258 - 7253925

13668