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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7243332_7243829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7243332 - 7243829

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCACTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TCATCTTTCACT

Flanking Amino Acid:

VHVNTSAVLKLSGASLPEWG

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

73.1

0.58

79.6

29.1

Major PPT

84.8

0.78

0.7

81.7

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

66.4

0.6

1.7

80.24

Associated Gene:

Gene:

POMT1

Ensembl Gene ID:

ENSAPLG00000014827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015508

7240258 - 7253925

13668