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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7244111_7245173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7244111 - 7245173

Intron Length:

1063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

TCTTGTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CTTGTCTTACAG

Flanking Amino Acid:

VHGITTRYLNTHDVAAPLSP

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.3

71.4

40.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

0.81

0.8

79.9

32.3

Minor 5ss

32.8

-2

2.9

37.6

Minor BPS

48.2

-0.2

1.9

55.39

46.1

Associated Gene:

Gene:

POMT1

Ensembl Gene ID:

ENSAPLG00000014827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015508

7240258 - 7253925

13668