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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7247084_7247686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7247084 - 7247686

Intron Length:

603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TTATGCTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTCCACTTACCC

Flanking Amino Acid:

MTSAFQASLEGGLARITQGQ

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

79.5

0.66

0.9

77.2

36.8

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

55.7

0.16

1.9

68.94

42.4

Associated Gene:

Gene:

POMT1

Ensembl Gene ID:

ENSAPLG00000014827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015508

7240258 - 7253925

13668