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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7247843_7248309_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7247843 - 7248309

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

GTGTTCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGAAAC

U12 Branch Point Sequence:

GGAGCATGAAAC

Flanking Amino Acid:

HMLGNQNLSNVSLLCHFLAR

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.4

67.1

44.6

Major BPS

49.4

-0

1.1

56.7

36.5

Major PPT

79.6

0.67

0.8

77.7

36.7

Minor 5ss

34.4

-1.8

3.5

47.3

42.3

Minor BPS

43.5

-0.5

1.8

48.98

39.7

Associated Gene:

Gene:

POMT1

Ensembl Gene ID:

ENSAPLG00000014827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015508

7240258 - 7253925

13668