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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7248404_7248974_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7248404 - 7248974

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CAGTTTTTATGC

Flanking Amino Acid:

LTGVACSCAVGVKYMGLFTY

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

34.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.5

0.6

0.9

72.6

37.6

Minor 5ss

32.5

-2

3.1

35.2

41.4

Minor BPS

45.5

-0.3

1.8

49.89

41.4

Associated Gene:

Gene:

POMT1

Ensembl Gene ID:

ENSAPLG00000014827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015508

7240258 - 7253925

13668