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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7251198_7251578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7251198 - 7251578

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

GCTTATACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

AAATTCTGAATT

Flanking Amino Acid:

PFGHMLLALGGYLGGFDGNF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.9

42.4

Major BPS

82.1

0.8

71.6

36.4

Major PPT

73.9

0.54

0.9

66.7

Minor 5ss

29.7

-2.3

3.5

40.5

Minor BPS

0.49

1.4

73.36

37.1

Associated Gene:

Gene:

POMT1

Ensembl Gene ID:

ENSAPLG00000014827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015508

7240258 - 7253925

13668