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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7252894_7253281_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7252894 - 7253281

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGGCTC

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

CAGAGCTGACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.4

0.32

1.4

59.1

45.8

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

81.5

0.71

0.8

77.2

37.1

Minor 5ss

37.2

-1.4

3.5

55.5

42.1

Minor BPS

40.7

-0.7

45.82

43.2

Associated Gene:

Gene:

POMT1

Ensembl Gene ID:

ENSAPLG00000014827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015508

7240258 - 7253925

13668