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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7262177_7263235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7262177 - 7263235

Intron Length:

1059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGCAT

U12 Branch Point Sequence:

AGCGACTTAAGC

Flanking Amino Acid:

QEMYSSIQPFRSQVYMHPSL

Intron Amino Acid Position:

1924

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

35.5

Major BPS

55.5

0.14

1.4

40.9

Major PPT

87.5

0.84

0.7

81.1

30.9

Minor 5ss

40.9

-1

3.2

59.5

Minor BPS

47.4

-0.2

1.9

54.2

43.5

Associated Gene:

Gene:

PRRC2B

Ensembl Gene ID:

ENSAPLG00000014308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029774

7257290 - 7289789

32500

ENSAPLT00000029767

7259646 - 7289789

30144

ENSAPLT00000020437

7258290 - 7289789

31500

ENSAPLT00000033382

7256191 - 7289789

33599

ENSAPLT00000014979

7258290 - 7289736

31447

ENSAPLT00000033153

7258385 - 7289789

31405