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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7263364_7263686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7263364 - 7263686

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTCATCTTAATT

Flanking Amino Acid:

TIPQQQSYQQAAAAQQIPIS

Intron Amino Acid Position:

1882

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

84.1

0.77

0.7

78.3

29.7

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

68.7

0.66

1.3

76.87

Associated Gene:

Gene:

PRRC2B

Ensembl Gene ID:

ENSAPLG00000014308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029774

7257290 - 7289789

32500

ENSAPLT00000029767

7259646 - 7289789

30144

ENSAPLT00000020437

7258290 - 7289789

31500

ENSAPLT00000033382

7256191 - 7289789

33599

ENSAPLT00000014979

7258290 - 7289736

31447

ENSAPLT00000033153

7258385 - 7289789

31405