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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7270486_7271111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7270486 - 7271111

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GCATTTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACAACTTTTATT

Flanking Amino Acid:

VLSQFELNYGSTIIDNRVSS

Intron Amino Acid Position:

1534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.5

28.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

70.6

0.46

69.4

41.5

Minor 5ss

33.5

-1.9

3.3

43.7

38.1

Minor BPS

49.8

0.07

1.6

63.38

41.5

Associated Gene:

Gene:

PRRC2B

Ensembl Gene ID:

ENSAPLG00000014308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029774

7257290 - 7289789

32500

ENSAPLT00000029767

7259646 - 7289789

30144

ENSAPLT00000020437

7258290 - 7289789

31500

ENSAPLT00000033382

7256191 - 7289789

33599

ENSAPLT00000014979

7258290 - 7289736

31447

ENSAPLT00000033153

7258385 - 7289789

31405