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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7274907_7275534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7274907 - 7275534

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

ATCTCCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTTGTTTATCT

Flanking Amino Acid:

DNITMEGLHARNDSSYSASP

Intron Amino Acid Position:

779

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

76.4

0.59

0.8

73.7

30.6

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

58.6

0.35

80.3

41.9

Associated Gene:

Gene:

PRRC2B

Ensembl Gene ID:

ENSAPLG00000014308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029774

7257290 - 7289789

32500

ENSAPLT00000029767

7259646 - 7289789

30144

ENSAPLT00000020437

7258290 - 7289789

31500

ENSAPLT00000033382

7256191 - 7289789

33599

ENSAPLT00000014979

7258290 - 7289736

31447

ENSAPLT00000033153

7258385 - 7289789

31405