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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7279602_7280271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7279602 - 7280271

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGAAG

5'SS Class:

major

3'SS Sequence:

TTCTTCTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

CAAGGCTTATTT

Flanking Amino Acid:

VQENGHTFRRATPEFHAQDV

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

63.1

42.9

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

88.3

0.86

0.7

81.1

Minor 5ss

29.9

-2.3

3.3

38.8

46.5

Minor BPS

44.7

-0.3

57.28

45.7

Associated Gene:

Gene:

PRRC2B

Ensembl Gene ID:

ENSAPLG00000014308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029774

7257290 - 7289789

32500

ENSAPLT00000029767

7259646 - 7289789

30144

ENSAPLT00000020437

7258290 - 7289789

31500

ENSAPLT00000033382

7256191 - 7289789

33599

ENSAPLT00000014979

7258290 - 7289736

31447

ENSAPLT00000033153

7258385 - 7289789

31405