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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7280588_7280977_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7280588 - 7280977

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TCATGCTCACTG

Flanking Amino Acid:

NGWSSSSEYQKPSMGSVLRQ

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

38.1

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

82.4

0.73

0.9

80.4

31.6

Minor 5ss

38.2

-1.3

3.1

49.4

46.8

Minor BPS

42.9

-0.6

2.2

47.84

45.9

Associated Gene:

Gene:

PRRC2B

Ensembl Gene ID:

ENSAPLG00000014308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029774

7257290 - 7289789

32500

ENSAPLT00000029767

7259646 - 7289789

30144

ENSAPLT00000020437

7258290 - 7289789

31500

ENSAPLT00000033382

7256191 - 7289789

33599

ENSAPLT00000014979

7258290 - 7289736

31447

ENSAPLT00000033153

7258385 - 7289789

31405