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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7365816_7366663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7365816 - 7366663

Intron Length:

848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GCGTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATC

Flanking Amino Acid:

GFSAFGTVGGGFGFGSTNTS

Intron Amino Acid Position:

1757

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.68

0.9

76.9

37.3

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

77.2

0.83

79.83

28.4

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929

ENSAPLT00000013944

7365124 - 7400052

34929