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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7366807_7370286_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7366807 - 7370286

Intron Length:

3480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCCAA

5'SS Class:

major

3'SS Sequence:

CTTTAAACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

TTCTCTTTAAAC

Flanking Amino Acid:

GTAAASAGGFGFGGTSSNTA

Intron Amino Acid Position:

1709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

42.7

Major BPS

0.7

0.9

79.6

29.1

Major PPT

74.9

0.56

0.9

67.6

37.6

Minor 5ss

36.7

-1.5

39.2

46.1

Minor BPS

75.3

0.77

1.3

79.33

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929

ENSAPLT00000013944

7365124 - 7400052

34929