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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7370459_7372712_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7370459 - 7372712

Intron Length:

2254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTGT

5'SS Class:

weak_major

3'SS Sequence:

CTGTTTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGATAT

U12 Branch Point Sequence:

ATATTCTTGTCC

Flanking Amino Acid:

GFGFSSPTKAGGFGAAPVFG

Intron Amino Acid Position:

1652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.2

71.4

41.2

Major BPS

64.1

0.35

1.3

45.5

Major PPT

76.6

0.6

0.9

76.2

37.8

Minor 5ss

62.5

0.42

76.4

38.9

Minor BPS

45.5

-0.3

3.4

68.05

37.6

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929

ENSAPLT00000013944

7365124 - 7400052

34929