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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7375313_7376784_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7375313 - 7376784

Intron Length:

1472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

GTTCTGGTAACT

Flanking Amino Acid:

SAGFSFCQASGFGSSNTGSV

Intron Amino Acid Position:

1526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

82.7

0.74

0.9

80.4

31.5

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

46.6

-0.1

2.6

73.56

43.3

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929

ENSAPLT00000013944

7365124 - 7400052

34929