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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7383899_7384587_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7383899 - 7384587

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTGG

5'SS Class:

weak_major

3'SS Sequence:

TTTTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

TTGACCTGAAGT

Flanking Amino Acid:

ATVATNQAKQTPLASSLKGQ

Intron Amino Acid Position:

840

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.2

62.3

44.7

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

54.4

0.15

2.1

67.3

43.8

Minor BPS

59.4

0.37

1.9

77.76

44.2

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929

ENSAPLT00000013944

7365124 - 7400052

34929