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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7384664_7387980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7384664 - 7387980

Intron Length:

3317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTCATTTAACA

Flanking Amino Acid:

ALTPAVSAVIGSSVPHSAAQ

Intron Amino Acid Position:

814

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.1

44.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.2

0.79

0.9

90.8

21.8

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

68.1

0.57

1.4

76.53

33.7

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013944

7365124 - 7400052

34929