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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7387807_7387980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7387807 - 7387980

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

GTTTGTGTAATG

Flanking Amino Acid:

ALTPAVSAVIGSFEDLLMFG

Intron Amino Acid Position:

814

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.1

44.6

Major BPS

67.7

0.44

38.9

Major PPT

89.4

0.89

0.7

81.6

35.5

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

46.8

-0.3

2.4

59.22

43.5

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929