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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7390545_7390638_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7390545 - 7390638

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGTCT

5'SS Class:

major

3'SS Sequence:

TTTTATTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACTTTTTTATTT

Flanking Amino Acid:

SHTKPLPKVPAKLSPVKQAQ

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

67.7

37.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.95

0.7

84.8

35.4

Minor 5ss

39.6

-1.2

3.3

45.1

Minor BPS

59.7

0.38

1.5

72.97

39.1

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929

ENSAPLT00000013944

7365124 - 7400052

34929