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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7392012_7394166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7392012 - 7394166

Intron Length:

2155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTACATGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTACAT

Flanking Amino Acid:

LDPKSEAQLQEIRRLHQYVK

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

71.6

38.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.6

0.55

70.8

39.4

Minor 5ss

39.9

-1.1

2.8

52.3

44.5

Minor BPS

56.1

0.27

1.7

77.18

39.4

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929

ENSAPLT00000013944

7365124 - 7400052

34929