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Intron Name: Anas_platyrhynchos_platyrhynchos_18_7395166_7395771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7395166 - 7395771

Intron Length:

606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAATGAGA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TAATATTGGAGT

Flanking Amino Acid:

SSAAKPSSTPGKSSVPSAAL

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

62.8

43.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

92.5

0.96

0.6

85.6

29.1

Minor 5ss

32.2

-2

3.1

40.5

45.5

Minor BPS

-0.3

1.9

62.29

41.5

Associated Gene:

Gene:

NUP214

Ensembl Gene ID:

ENSAPLG00000013269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019157

7365124 - 7400052

34929

ENSAPLT00000013944

7365124 - 7400052

34929